Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4E8V

Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of K+ and Ba2+

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyCCD
Collection date2011-07-08
DetectorADSC QUANTUM 315
Wavelength(s)1.4850
Spacegroup nameP 21 21 21
Unit cell lengths88.727, 96.548, 227.673
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.908 - 3.995
R-factor0.2992
Rwork0.297
R-free0.34550
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3igi
RMSD bond length0.008
RMSD bond angle1.300
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: 1.7.1_743))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]113.8374.210
High resolution limit [Å]3.9903.990
Rmerge0.0690.787
Number of reflections16781
<I/σ(I)>9.41.5
Completeness [%]98.398.2
Redundancy3.33.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7303100 mM potassium acetate, 100 mM potassium chloride, 150 mM barium chloride, 50 mM HEPES sodium, pH 7.0, 6% PEG8000, VAPOR DIFFUSION, HANGING DROP, temperature 303K

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon