4E8V
Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of K+ and Ba2+
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-07-08 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.4850 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 88.727, 96.548, 227.673 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.908 - 3.995 |
R-factor | 0.2992 |
Rwork | 0.297 |
R-free | 0.34550 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3igi |
RMSD bond length | 0.008 |
RMSD bond angle | 1.300 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.7.1_743)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 113.837 | 4.210 |
High resolution limit [Å] | 3.990 | 3.990 |
Rmerge | 0.069 | 0.787 |
Number of reflections | 16781 | |
<I/σ(I)> | 9.4 | 1.5 |
Completeness [%] | 98.3 | 98.2 |
Redundancy | 3.3 | 3.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 303 | 100 mM potassium acetate, 100 mM potassium chloride, 150 mM barium chloride, 50 mM HEPES sodium, pH 7.0, 6% PEG8000, VAPOR DIFFUSION, HANGING DROP, temperature 303K |