4E6Y
Type II citrate synthase from Vibrio vulnificus.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-02-22 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9792 |
Spacegroup name | P 63 2 2 |
Unit cell lengths | 109.717, 109.717, 153.649 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 45.400 - 2.500 |
R-factor | 0.1907 |
Rwork | 0.189 |
R-free | 0.23140 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3l96 |
RMSD bond length | 0.014 |
RMSD bond angle | 1.673 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.400 | 50.000 | 2.540 |
High resolution limit [Å] | 2.500 | 6.780 | 2.500 |
Rmerge | 0.146 | 0.083 | 0.939 |
Number of reflections | 19591 | ||
<I/σ(I)> | 9.2 | 4.7 | |
Completeness [%] | 99.9 | 98.9 | 100 |
Redundancy | 17.4 | 15.8 | 17.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 289 | 0.2 M sodium formate, 20 % PEG-3350, 20 mM HEPES buffer, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 289K |