Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4E2R

Interactions of Ba2+ with a non-self-complementary Z-type DNA duplex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsBRUKER AXS MICROSTAR
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2008-09-11
DetectorMAR scanner 345 mm plate
Wavelength(s)1.5418
Spacegroup nameP 21 21 21
Unit cell lengths17.544, 30.512, 44.210
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution25.110 - 1.670
R-factor0.18898
Rwork0.187
R-free0.22691
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)fiber model of Z-type DNA built using the program InsightII
RMSD bond length0.010
RMSD bond angle1.919
Data reduction softwareAUTOMAR
Phasing softwareAMoRE
Refinement softwareREFMAC (5.5.0109)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0001.730
High resolution limit [Å]1.6701.670
Rmerge0.0880.271
Number of reflections2778
<I/σ(I)>6.11.7
Completeness [%]92.089.6
Redundancy4.544.37
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7293drop: 50mM sodium cacodylate trihydrate buffer (pH 7.0), 10mM barium dichloride dihydrate, 0.5mM spermine, reservoir: 30% 2-methyl-2,4-pentanediol (MPD), VAPOR DIFFUSION, HANGING DROP, temperature 293K

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon