4E1C
Structure of a VgrG Vibrio cholerae toxin ACD domain in complex with ADP and Mg++
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | BRUKER AXS MICROSTAR |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2012-03-02 |
Detector | MAR scanner 345 mm plate |
Spacegroup name | P 43 2 2 |
Unit cell lengths | 128.460, 128.460, 76.390 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.620 - 2.250 |
R-factor | 0.175 |
Rwork | 0.174 |
R-free | 0.19600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4dtf |
RMSD bond length | 0.010 |
RMSD bond angle | 1.080 |
Data reduction software | HKL-3000 |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | BUSTER (2.11.2) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.300 |
High resolution limit [Å] | 2.250 | 2.250 |
Rmerge | 0.053 | 0.436 |
Number of reflections | 28824 | |
<I/σ(I)> | 21.4 | 3.7 |
Completeness [%] | 100.0 | 93.2 |
Redundancy | 4.2 | 4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 6.3 | 293 | 300 nL of protein at 13mg/mL, 100 nL of 2.4 M AmSO4, 0.1 M Bi-Tris, pH 6.3, VAPOR DIFFUSION, SITTING DROP, temperature 293K |