4E0R
Structure of the chicken MHC class I molecule BF2*0401
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2008-07-06 |
Detector | RIGAKU RAXIS VII |
Wavelength(s) | 1.5418 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 166.196, 40.286, 131.585 |
Unit cell angles | 90.00, 119.71, 90.00 |
Refinement procedure
Resolution | 43.830 - 2.260 |
R-factor | 0.2 |
Rwork | 0.197 |
R-free | 0.25500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3bev |
RMSD bond length | 0.003 |
RMSD bond angle | 0.771 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | AMoRE |
Refinement software | PHENIX ((PHENIX.REFINE: 1.5_2)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.360 |
High resolution limit [Å] | 2.259 | 2.260 |
Rmerge | 0.055 | 0.196 |
Number of reflections | 34950 | |
<I/σ(I)> | 19.6 | 6.8 |
Completeness [%] | 96.6 | 94 |
Redundancy | 3.1 | 3.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 291 | 0.1M HEPES BUFFER (PH 7.0), 5% MPD, 20% PEG 6000, VAPOR DIFFUSION, HANGING DROP, temperature 291K |