4E0K
Crystal Structure of the amyloid-fibril forming peptide KDWSFY derived from human Beta 2 Microglobulin (58-63)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-12-11 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97911 |
Spacegroup name | P 61 |
Unit cell lengths | 62.370, 62.370, 11.730 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 14.981 - 0.970 |
R-factor | 0.1138 |
Rwork | 0.112 |
R-free | 0.13110 |
Structure solution method | SIRAS |
RMSD bond length | 0.010 |
RMSD bond angle | 1.417 |
Data scaling software | XSCALE |
Refinement software | PHENIX (1.7_650) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 14.981 | 1.000 | |
High resolution limit [Å] | 0.970 | 4.340 | 0.970 |
Rmerge | 0.069 | 0.043 | 0.448 |
Number of reflections | 326 | 2168 | |
<I/σ(I)> | 12.66 | 31.18 | 2.42 |
Completeness [%] | 99.3 | 95 | 97.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 290 | 0.1M BIS-TRIS PROPANE pH 6.5, 0.2 M SODIUM FLUORIDE, 20% (w/v) PEG 3350, vapor diffusion, hanging drop, temperature 290K |