Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4DZH

Crystal structure of an adenosine deaminase from xanthomonas campestris (target nysgrc-200456) with bound zn

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 31-ID
Synchrotron siteAPS
Beamline31-ID
Temperature [K]100
Detector technologyCCD
Collection date2011-07-27
DetectorRAYONIX MX225HE
Wavelength(s)0.9793
Spacegroup nameC 1 2 1
Unit cell lengths133.645, 53.150, 67.390
Unit cell angles90.00, 106.54, 90.00
Refinement procedure
Resolution17.968 - 1.552
R-factor0.2095
Rwork0.208
R-free0.23320
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3lnp
RMSD bond length0.024
RMSD bond angle1.508
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.7.3_928)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0001.650
High resolution limit [Å]1.5501.550
Rmerge0.0680.527
Number of reflections65349
<I/σ(I)>18.92.8
Completeness [%]99.6100
Redundancy3.73.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1sitting drop vapor diffuction7298Protein (10 mM Hepes, pH 7.8, 150 mM NaCl, 10% glycerol, 5 mM MgCl); Reservoir (1.0 M Succinic acid pH 7.0, 0.1 M HEPES pH 7.0, 1% Peg MME 2000); Cryoprotection (Reservoir, + 20% glycerol + 10 mM ZnCl, 10 mM Inosine), sitting drop vapor diffuction, temperature 298K

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon