4DWO
Crystal structure of a haloacid dehalogenase-like hydrolase (Target EFI-900331) from Bacteroides thetaiotaomicron with bound Mg crystal form II
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-01-01 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.9793 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 35.696, 68.178, 96.645 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 24.161 - 1.500 |
R-factor | 0.1781 |
Rwork | 0.177 |
R-free | 0.20180 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3niw |
RMSD bond length | 0.016 |
RMSD bond angle | 1.616 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHENIX |
Refinement software | PHENIX (1.7.3_928) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.580 |
High resolution limit [Å] | 1.500 | 1.500 |
Rmerge | 0.064 | 0.787 |
Number of reflections | 38562 | |
<I/σ(I)> | 17.2 | 2.8 |
Completeness [%] | 99.7 | 100 |
Redundancy | 7 | 6.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.75 | 298 | protein solution: 10 mM HEPES, pH 7.8, 150 mM sodium chloride, 10% glycerol, 5 mM magnesium, reservoir solution: 20% PEG3350, 100 mM Bis-Tris, pH 5.5, 3% TMAO, cryoprotectant: reservoir solution + 20% glycerol + 50 mM magnesium chloride, VAPOR DIFFUSION, SITTING DROP, temperature 298K |