4DWE
Crystal structure of a putative polysaccharide deacetylase (BACOVA_03992) from Bacteroides ovatus ATCC 8483 at 2.01 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL11-1 |
Synchrotron site | SSRL |
Beamline | BL11-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-02-08 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.91837,0.9796,0.97925 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 68.762, 72.975, 95.424 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.571 - 2.010 |
R-factor | 0.1509 |
Rwork | 0.149 |
R-free | 0.19360 |
Structure solution method | MAD |
RMSD bond length | 0.017 |
RMSD bond angle | 1.770 |
Data reduction software | XDS |
Data scaling software | XSCALE (December 29, 2011) |
Phasing software | SHELX |
Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.571 | 2.080 | |
High resolution limit [Å] | 2.010 | 4.320 | 2.010 |
Rmerge | 0.094 | 0.037 | 0.437 |
Number of reflections | 32317 | 6028 | 5721 |
<I/σ(I)> | 7.17 | 19 | 1.8 |
Completeness [%] | 97.0 | 96.6 | 95.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 277 | 0.17M sodium acetate, 25.5% polyethylene glycol 4000, 15.0% Glycerol, 0.1M tris hydrochloride pH 8.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K |