4DO7
Crystal structure of an amidohydrolase (cog3618) from burkholderia multivorans (target efi-500235) with bound zn, space group c2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-11-15 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.9793 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 103.332, 76.728, 82.862 |
Unit cell angles | 90.00, 117.67, 90.00 |
Refinement procedure
Resolution | 30.626 - 1.700 |
R-factor | 0.1777 |
Rwork | 0.176 |
R-free | 0.20910 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4dnm |
RMSD bond length | 0.007 |
RMSD bond angle | 1.021 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.16) |
Phasing software | PHENIX |
Refinement software | PHENIX (1.7.3_928) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 73.388 | 40.383 | 1.790 |
High resolution limit [Å] | 1.700 | 5.380 | 1.700 |
Rmerge | 0.036 | 0.399 | |
Total number of observations | 6988 | 29480 | |
Number of reflections | 62061 | ||
<I/σ(I)> | 10.7 | 15.3 | 2 |
Completeness [%] | 98.5 | 94.3 | 98.9 |
Redundancy | 3.5 | 3.6 | 3.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | sitting drop vapor diffuction | 7.5 | 298 | Protein (10 mM Hepes, pH 7.8, 150 mM NaCl, 10% glycerol, 0.5 mM ZnCl, 0.5 mM Fuconate 1,4-lactone; Reservoir (1.26 M AmmSO4, 100 mM HEPES pH 7.5); Cryoprotection (Reservoir, + 20% glycerol), sitting drop vapor diffuction, temperature 298K |