4DKT
Crystal structure of human peptidylarginine deiminase 4 in complex with N-acetyl-L-threonyl-L-alpha-aspartyl-N5-[(1E)-2-fluoroethanimidoyl]-L-ornithinamide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-07-06 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97856 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 147.654, 61.079, 115.382 |
Unit cell angles | 90.00, 124.54, 90.00 |
Refinement procedure
Resolution | 41.442 - 2.980 |
R-factor | 0.1925 |
Rwork | 0.191 |
R-free | 0.22950 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1wda |
RMSD bond length | 0.006 |
RMSD bond angle | 1.049 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | PHENIX (1.7.1_743) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.090 |
High resolution limit [Å] | 2.980 | 6.420 | 2.980 |
Rmerge | 0.080 | 0.030 | 0.555 |
Number of reflections | 17606 | ||
<I/σ(I)> | 10.2 | ||
Completeness [%] | 99.9 | 99.5 | 100 |
Redundancy | 7.6 | 7.2 | 7.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 291 | 0.1 M imidazole, pH 8.0, 0.2 M lithium sulfate, 10% w/v PEG1500, VAPOR DIFFUSION, SITTING DROP, temperature 291K |