4DHK
Crystal structure of a deoxycytidine triphosphate deaminase (dCTP deaminase) from Burkholderia thailandensis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-11-07 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.0332 |
Spacegroup name | H 3 |
Unit cell lengths | 92.870, 92.870, 137.590 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 69.440 - 2.050 |
R-factor | 0.168 |
Rwork | 0.168 |
R-free | 0.18600 |
Structure solution method | MR |
Starting model (for MR) | 3km3 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.417 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 69.440 | 2.100 | |
High resolution limit [Å] | 2.050 | 9.170 | 2.050 |
Rmerge | 0.044 | 0.020 | 0.458 |
Number of reflections | 27763 | 308 | 2046 |
<I/σ(I)> | 22.71 | 64.6 | 3.4 |
Completeness [%] | 100.0 | 97.8 | 100 |
Redundancy | 4.52 | 4.48 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 290 | Internal tracking number 225926. JCSG+ well A2. 20.0% w/v PEG3000, 0.1M Ammonium citrate/citric acid, 20% Ethylene glycol Cryo. ButhA.00973.a.A1 PS01180 46.83mg/ml, pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 290K |