4DER
Crystal Structure of the Wild Type TTR Binding Apigenin (TTRwt:API)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LNLS BEAMLINE W01B-MX2 |
Synchrotron site | LNLS |
Beamline | W01B-MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-12 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.4589 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 43.152, 85.132, 64.458 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 21.490 - 1.900 |
R-factor | 0.1917 |
Rwork | 0.189 |
R-free | 0.23530 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3cfm |
RMSD bond length | 0.014 |
RMSD bond angle | 1.422 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC (5.5.0102) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 1.920 |
High resolution limit [Å] | 1.850 | 3.980 | 1.850 |
Rmerge | 0.089 | 0.044 | 0.506 |
Number of reflections | 19821 | ||
<I/σ(I)> | 7.9 | ||
Completeness [%] | 94.4 | 99.4 | 72.5 |
Redundancy | 5.1 | 5.2 | 3.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 0.2 M calcium chloride, 0.1 M HEPES, pH 7.5, 28% PEG400, VAPOR DIFFUSION, HANGING DROP, temperature 293K |