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4D5R

Structure of N-terminally truncated A49 from Vaccinia Virus Western Reserve

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2013-05-19
DetectorDECTRIS PILATUS 2M
Spacegroup nameP 1 21 1
Unit cell lengths56.850, 42.740, 67.190
Unit cell angles90.00, 100.51, 90.00
Refinement procedure
Resolution33.030 - 1.900
R-factor0.18735
Rwork0.185
R-free0.22640
Structure solution methodSIRAS
Starting model (for MR)NONE
RMSD bond length0.018
RMSD bond angle1.749
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareautoSHARP
Refinement softwareREFMAC (5.8.0073)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]33.0001.950
High resolution limit [Å]1.9001.900
Rmerge0.0401.150
Number of reflections25211
<I/σ(I)>32.22.9
Completeness [%]99.699
Redundancy14.113.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1293CRYSTALS WERE GROWN BY MIXING 2 UL PROTEIN (20-21 MG/ML) WITH 2 UL RESERVOIR SOLUTION AND EQUILIBRATING AT 20 C AGAINST 500 UL RESERVOIRS CONTAINING 1.3- 1.5 M SODIUM MALONATE PH 6.8, 1% (VOL/VOL) PEG 400 AND 4-10% (VOL/VOL) GLYCEROL, THE BEST CRYSTALS BEING OBTAINED WHEN THE RESERVOIR WAS OVERLAID WITH 100 UL OF A 1:1 MIXTURE OF PARAFFIN AND SILICONE OIL (MOLECULAR DIMENSIONS). CRYSTALS WERE CRYOPROTECTED BY BRIEF IMMERSION IN 2.1 M SODIUM MALONATE, 1% (VOL/VOL) PEG 400 AND 5% (VOL/VOL) GLYCEROL.

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PDB entries from 2024-08-07

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