4D5R
Structure of N-terminally truncated A49 from Vaccinia Virus Western Reserve
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-05-19 |
Detector | DECTRIS PILATUS 2M |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 56.850, 42.740, 67.190 |
Unit cell angles | 90.00, 100.51, 90.00 |
Refinement procedure
Resolution | 33.030 - 1.900 |
R-factor | 0.18735 |
Rwork | 0.185 |
R-free | 0.22640 |
Structure solution method | SIRAS |
Starting model (for MR) | NONE |
RMSD bond length | 0.018 |
RMSD bond angle | 1.749 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | autoSHARP |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 33.000 | 1.950 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.040 | 1.150 |
Number of reflections | 25211 | |
<I/σ(I)> | 32.2 | 2.9 |
Completeness [%] | 99.6 | 99 |
Redundancy | 14.1 | 13.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 293 | CRYSTALS WERE GROWN BY MIXING 2 UL PROTEIN (20-21 MG/ML) WITH 2 UL RESERVOIR SOLUTION AND EQUILIBRATING AT 20 C AGAINST 500 UL RESERVOIRS CONTAINING 1.3- 1.5 M SODIUM MALONATE PH 6.8, 1% (VOL/VOL) PEG 400 AND 4-10% (VOL/VOL) GLYCEROL, THE BEST CRYSTALS BEING OBTAINED WHEN THE RESERVOIR WAS OVERLAID WITH 100 UL OF A 1:1 MIXTURE OF PARAFFIN AND SILICONE OIL (MOLECULAR DIMENSIONS). CRYSTALS WERE CRYOPROTECTED BY BRIEF IMMERSION IN 2.1 M SODIUM MALONATE, 1% (VOL/VOL) PEG 400 AND 5% (VOL/VOL) GLYCEROL. |