4CAB
The refined structure of catalase DR1998 from Deinococcus radiodurans at 2.6 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-05-26 |
Detector | DECTRIS PILATUS 6M |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 97.326, 311.875, 145.628 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.402 - 2.599 |
R-factor | 0.2363 |
Rwork | 0.236 |
R-free | 0.23630 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | LOOPS TRUNCATE ENSEMBLE OF PDB ENTRIES 2J2M 1gwe 2iuf 1dgf 1sy7 1m7s |
RMSD bond length | 0.006 |
RMSD bond angle | 0.663 |
Data reduction software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((PHENIX.REFINE)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.400 | 2.760 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.310 | 0.840 |
Number of reflections | 68047 | |
<I/σ(I)> | 5.34 | 1.7 |
Completeness [%] | 99.3 | 97.5 |
Redundancy | 5.2 | 4.57 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 298 | PROTEIN WAS CRYSTALLIZED AT 298K, FROM 0.2M MAGNESIUM ACETATE, 0.1 NA-CACODYLATE PH 6.5 AND 20% PEG 8000. |