4AN2
Crystal structures of human MEK1 with carboxamide-based allosteric inhibitor XL518 (GDC-0973), or related analogs.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.1 |
Synchrotron site | ALS |
Beamline | 8.2.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2005-11-15 |
Detector | ADSC QUANTUM 315r |
Spacegroup name | P 61 |
Unit cell lengths | 108.844, 108.844, 47.710 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 94.070 - 2.500 |
R-factor | 0.21493 |
Rwork | 0.211 |
R-free | 0.29898 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | IN HOUSE MEK1-AMPPCP STRUCTURE |
RMSD bond length | 0.021 |
RMSD bond angle | 2.178 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | REFMAC (5.2.0005) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 54.390 | 2.680 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.070 | 0.560 |
Number of reflections | 12819 | |
<I/σ(I)> | 15.2 | 2.3 |
Completeness [%] | 99.8 | 99.9 |
Redundancy | 4.4 | 4.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 8.9 | MEK1 (8 MG/ML) WAS INCUBATED WITH INHIBITOR (300 MICROMOLAR FINAL CONCENTRATION) AND AMPPCP (2.8 MM FINAL CONCENTRATION) FOR TWO HOURS ON ICE, FOLLOWED BY CRYSTALLIZION VS. 26.5% PEG-2000 MME, 0.1 M TRIMETHYLAMINE N- OXIDE AND 0.1 M TRIS (PH 8.9) |