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4AB8

Fragments bound to bovine trypsin for the SAMPL challenge

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX1
Synchrotron siteAustralian Synchrotron
BeamlineMX1
Temperature [K]100
Detector technologyCCD
Collection date2011-10-25
DetectorADSC QUANTUM 210r
Spacegroup nameP 31 2 1
Unit cell lengths54.323, 54.323, 105.320
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution47.050 - 1.600
R-factor0.17059
Rwork0.169
R-free0.20470
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1k1m
RMSD bond length0.022
RMSD bond angle2.253
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwareREFMAC (5.6.0117)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]52.7001.690
High resolution limit [Å]1.6001.600
Rmerge0.0700.660
Number of reflections24461
<I/σ(I)>22.63.4
Completeness [%]99.999.9
Redundancy108.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
15.822.5% PEG 3350, 0.18 M AMMONIUM SULFATE, 0.12 M SODIUM THIOCYANATE, 0.09 M BIS-TRIS PH 5.5, 0.01 M TRIS PH 8.5 (FINAL MEASURED PH=5.82). THE PROTEIN WAS AT 2 MM (47 MG/ML), WITH 4 MM BENZYLAMINE AND 10 MM CALCIUM CHLORIDE ADDED TO STABILIZE IT. THE CRYSTALLIZATIONS WERE SET UP WITH A PHOENITO PROTOCOL (NEWMAN ET AL. 2008), WHERE A PHOENIX ROBOT (ART ROBBINS INSTRUMENTS, SUNNYSIDE, CA) WAS USED TO DISPENSE THE PROTEIN INTO AN SD2 CRYSTALLIZATION PLATE (PRE-FILLED WITH 50 ML RESERVOIR SOLUTION) AND A MOSQUITO ROBOT (TTP LABTECH, MELBOURN, UK) WAS USED TO DISPENSE THE RESERVOIR SOLUTION AND SEED STOCK OVER THE PROTEIN DROPLET.

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