4AB7
Crystal structure of a tetrameric acetylglutamate kinase from Saccharomyces cerevisiae complexed with its substrate N- acetylglutamate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-05-08 |
Detector | MARRESEARCH |
Spacegroup name | P 1 |
Unit cell lengths | 92.883, 103.269, 111.313 |
Unit cell angles | 77.31, 89.27, 70.43 |
Refinement procedure
Resolution | 108.360 - 3.250 |
R-factor | 0.195 |
Rwork | 0.193 |
R-free | 0.23757 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3zzi |
RMSD bond length | 0.014 |
RMSD bond angle | 1.760 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 108.000 | 3.430 |
High resolution limit [Å] | 3.250 | 3.250 |
Rmerge | 0.070 | 0.460 |
Number of reflections | 57473 | |
<I/σ(I)> | 9.6 | 1.7 |
Completeness [%] | 96.2 | 96.2 |
Redundancy | 1.9 | 1.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277 | PROTEIN WAS SUBJECTED TO REDUCTIVE METHYLATION OF SURFACE EXPOSED LYSINES WITH ABC PREVIOUS TO CRYSTALLIZATION. 10 MG/ML PROTEIN IN 20MM HEPES PH7.5, 0.5 M NACL, 1MM MSH, AND SUPPLEMENTED WITH 40 MM NAG, WAS CRYSTALLIZED IN PRESENCE OF 0.2 M AMMONIUM CITRATE PH 7.0, 12 % PEG3350 AND 1.5 % PEG 6000 AS CRYSTALLIZATION SOLUTION, IN SITTING DROPS AT 4C. CRYOBUFFER SOLUTION WAS THAT OF CRYSTALLIZATION WITH PEG3350 ENRICHED TO 40% |