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4A3N

Crystal Structure of HMG-BOX of Human SOX17

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-5A
Synchrotron sitePhoton Factory
BeamlineBL-5A
Temperature [K]100
Detector technologyCCD
DetectorADSC QUANTUM 315r
Spacegroup nameC 1 2 1
Unit cell lengths94.281, 22.525, 66.668
Unit cell angles90.00, 129.09, 90.00
Refinement procedure
Resolution23.660 - 2.400
R-factor0.202
Rwork0.202
R-free0.26700
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3f27
RMSD bond length0.007
RMSD bond angle1.100
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwareCNS (1.2)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.530
High resolution limit [Å]2.4002.400
Rmerge0.0800.190
Number of reflections4389
<I/σ(I)>22.923.4
Completeness [%]98.0100
Redundancy3.43.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1

227561

PDB entries from 2024-11-20

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