4Z9P
Crystal structure of Ebola virus nucleoprotein core domain at 1.8A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-11-10 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97848 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 59.845, 162.877, 31.280 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.719 - 1.792 |
R-factor | 0.1923 |
Rwork | 0.191 |
R-free | 0.22510 |
Structure solution method | SAD |
RMSD bond length | 0.007 |
RMSD bond angle | 0.978 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.830 |
High resolution limit [Å] | 1.792 | 4.880 | 1.800 |
Rmerge | 0.084 | 0.064 | 0.546 |
Rmeas | 0.088 | 0.068 | 0.575 |
Rpim | 0.027 | 0.022 | 0.179 |
Total number of observations | 312835 | ||
Number of reflections | 29588 | ||
<I/σ(I)> | 6.7 | ||
Completeness [%] | 99.8 | 99.8 | 99.9 |
Redundancy | 10.6 | 9.9 | 10 |
CC(1/2) | 0.989 | 0.900 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 7 | 289 | 200mM ammonium citrate tribasic pH 7.0, 20% (w/v) PEG 3350 |