4Z0E
Crystal structure of FVO strain Plasmodium falciparum AMA1 in complex with the RON2hp [Phe2038TRN] peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2014-12-02 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 0.9537 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 37.970, 72.020, 115.290 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 33.588 - 1.900 |
R-factor | 0.1907 |
Rwork | 0.189 |
R-free | 0.22870 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4r1a |
RMSD bond length | 0.004 |
RMSD bond angle | 0.801 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 36.010 | 36.010 | 1.940 |
High resolution limit [Å] | 1.900 | 9.110 | 1.900 |
Rmerge | 0.178 | 0.052 | 0.655 |
Rpim | 0.072 | 0.023 | 0.284 |
Total number of observations | 169637 | 1521 | 6617 |
Number of reflections | 24645 | ||
<I/σ(I)> | 8 | 17.3 | 2.6 |
Completeness [%] | 96.2 | 98 | 73.1 |
Redundancy | 6.9 | 5.4 | 5.8 |
CC(1/2) | 0.994 | 0.994 | 0.493 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 15-20% PEG400, 0.1M Tris-HCl, pH 8.6, 0.1 M sodium acetate and 20% isopropanol |