4YX1
SpaO(SPOA2)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | NSLS BEAMLINE X29A |
| Synchrotron site | NSLS |
| Beamline | X29A |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2013-07-31 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 0.979 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 35.000, 41.270, 48.000 |
| Unit cell angles | 90.00, 103.92, 90.00 |
Refinement procedure
| Resolution | 31.262 - 1.350 |
| R-factor | 0.1747 |
| Rwork | 0.172 |
| R-free | 0.20530 |
| Structure solution method | SAD |
| RMSD bond length | 0.007 |
| RMSD bond angle | 1.093 |
| Data scaling software | Aimless (0.2.7) |
| Phasing software | PHENIX |
| Refinement software | PHENIX |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 41.270 | 41.270 | 1.370 |
| High resolution limit [Å] | 1.350 | 7.390 | 1.350 |
| Rmerge | 0.146 | 0.122 | 1.281 |
| Rpim | 0.059 | 0.054 | 0.511 |
| Total number of observations | 203967 | 849 | 10254 |
| Number of reflections | 29266 | ||
| <I/σ(I)> | 8.6 | 15.5 | 2.1 |
| Completeness [%] | 99.7 | 76.7 | 100 |
| Redundancy | 7 | 5.6 | 7.1 |
| CC(1/2) | 0.994 | 0.981 | 0.750 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 293 | SpaO(232-297) was concentrated to 8mg/mL and crystallized with 35% PEG400, 200mM calcium acetate, 100mM sodium acetate pH=5.0. Crystals were cryoprotected in the mother liquor. Microseeding was employed to enhance crystal uniformity and diffraction. Briefly, crystals to be seeded were harvested in precipitant solution and vortexed in a microfuge tube with a small stir bar for ~60 seconds. The slurry of microseeds was serially dilluted (5-10-fold steps) in precipitant solution and 5 selected microseed-precipitant mixtures were mixed with fresh protein as in a normal hanging drop experiment. |






