4YVP
Crystal Structure of AKR1C1 complexed with glibenclamide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SEALED TUBE |
Source details | OXFORD DIFFRACTION ENHANCE ULTRA |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-08-27 |
Detector | OXFORD ONYX CCD |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 49.545, 76.168, 88.706 |
Unit cell angles | 90.00, 94.88, 90.00 |
Refinement procedure
Resolution | 88.380 - 2.600 |
R-factor | 0.21338 |
Rwork | 0.212 |
R-free | 0.24724 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3nty |
RMSD bond length | 0.011 |
RMSD bond angle | 1.571 |
Data scaling software | SCALA (3.3.21) |
Refinement software | REFMAC (5.8.0123) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 88.385 | 25.389 | 2.667 |
High resolution limit [Å] | 2.600 | 8.220 | 2.600 |
Rmerge | 0.071 | 0.667 | |
Rmeas | 0.277 | ||
Rpim | 0.140 | 0.042 | 0.395 |
Total number of observations | 79376 | 2260 | 11424 |
Number of reflections | 19305 | ||
<I/σ(I)> | 5.1 | 10.1 | 2.2 |
Completeness [%] | 99.8 | 95.8 | 100 |
Redundancy | 3.9 | 3.5 | 3.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.3 | 289 | 23-27% (w/v) PEG 4000, 100 mM Hepes, 10mM CaCl2, 0.4M NaCl |