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4Y8C

Crystal structure of phosphodiesterase 9 in complex with (S)-C33

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-BM
Synchrotron siteAPS
Beamline22-BM
Temperature [K]100
Detector technologyCCD
Collection date2014-12-13
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)1.05
Spacegroup nameP 41 21 2
Unit cell lengths104.719, 104.719, 270.274
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution97.650 - 2.700
R-factor0.20654
Rwork0.205
R-free0.23119
RMSD bond length0.008
RMSD bond angle1.125
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareAMoRE
Refinement softwareREFMAC (5.8.0073)
Data quality characteristics
 Overall
Low resolution limit [Å]100.000
High resolution limit [Å]2.700
Rmerge0.125
Number of reflections42348
<I/σ(I)>7.2
Completeness [%]100.0
Redundancy16.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.52770.1 M HEPES, pH 7.5, 3.0 M sodium formate, soaked in crystallization buffer + 2 mM (S)-C33 at 298K for 1 day

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