4XTD
Structure of the covalent intermediate E-XMP* of the IMP dehydrogenase of Ashbya gossypii
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-11-29 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97926 |
Spacegroup name | P 4 |
Unit cell lengths | 117.201, 117.201, 56.095 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.454 - 2.050 |
R-factor | 0.1849 |
Rwork | 0.183 |
R-free | 0.21430 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4avf |
RMSD bond length | 0.003 |
RMSD bond angle | 0.668 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: dev_1839)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.450 | 2.100 |
High resolution limit [Å] | 2.050 | 2.050 |
Rmerge | 0.130 | 2.222 |
Number of reflections | 48129 | |
<I/σ(I)> | 12.84 | 1.23 |
Completeness [%] | 100.0 | 100 |
Redundancy | 13.3 | 13.2 |
CC(1/2) | 0.645 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 25% (v/v) 1,2 propanediol, 0.1 M phosphate citrate pH 4.2, 5% (w/v) PEG-3000, 10% (v/v) glycerol |