4XQO
Crystal structure of hemagglutinin from Jiangxi-Donghu (2013) H10N8 influenza virus in complex with 6'-SLN
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-07-17 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 1.0716 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 64.069, 245.424, 71.298 |
Unit cell angles | 90.00, 112.46, 90.00 |
Refinement procedure
Resolution | 46.168 - 2.850 |
R-factor | 0.261 |
Rwork | 0.259 |
R-free | 0.29140 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4xq5 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.900 |
High resolution limit [Å] | 2.850 | 7.730 | 2.850 |
Rmerge | 0.145 | 0.052 | 0.589 |
Rmeas | 0.182 | 0.065 | 0.721 |
Rpim | 0.108 | 0.038 | 0.409 |
Total number of observations | 108611 | ||
Number of reflections | 42408 | ||
<I/σ(I)> | 7.6 | ||
Completeness [%] | 89.0 | 91.3 | 90.3 |
Redundancy | 2.6 | 2.7 | 2.5 |
CC(1/2) | 0.996 | 0.661 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 277.15 | 0.2 M NaSCN, 20% (w/v) PEG 3350 |