4X5Y
Menin in complex with MI-503
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-02-03 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.0331 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 48.378, 79.732, 124.747 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.970 - 1.590 |
R-factor | 0.1737 |
Rwork | 0.172 |
R-free | 0.20550 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.016 |
RMSD bond angle | 1.726 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC (5.7.0032) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.620 |
High resolution limit [Å] | 1.590 | 4.320 | 1.590 |
Rmerge | 0.075 | 0.039 | 0.810 |
Total number of observations | 461798 | ||
Number of reflections | 65752 | ||
<I/σ(I)> | 8.8 | ||
Completeness [%] | 100.0 | 99.7 | 100 |
Redundancy | 7 | 6.8 | 6.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 283 | 0.2 M ammonium acetate, 0.1 M HEPES and 25% w/v PEG 3,350. This solution was mixed 1:1 with 2.5mg/mL protein in 50mM Tris-HCl, 50mM NaCl, and 1mM TCEP. Prior to data collection, crystals were transferred into a cryo-solution containing 20% PEG550 MME and flash-frozen in liquid nitrogen |