4WRK
The 3D structure of D95N mutant DUTPase from phage phi11 of S. aureus reveals the molecular details for the coordination of a structural Mg(II) ion
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2014-05-15 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 108.420, 108.420, 167.050 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.570 - 2.900 |
R-factor | 0.211 |
Rwork | 0.208 |
R-free | 0.25830 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4gv8 |
RMSD bond length | 0.006 |
RMSD bond angle | 0.932 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.9_1692)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.570 | 3.000 |
High resolution limit [Å] | 2.250 | 2.900 |
Rmerge | 0.208 | 0.358 |
Number of reflections | 22585 | |
<I/σ(I)> | 8.6 | |
Completeness [%] | 100.0 | 99.9 |
Redundancy | 9.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 4.6 | 293 | 0.1M sodium acetate, 15 - 41.5% MPD, 0.02M calcium chloride |