4WR9
Crystal Structure of Surfactant Protein-A DED Mutant (E171D/P175E/K203D)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU RU300 |
| Temperature [K] | 100 |
| Detector technology | IMAGE PLATE |
| Collection date | 2012-10-10 |
| Detector | RIGAKU RAXIS IV |
| Wavelength(s) | 1.5418 |
| Spacegroup name | P 63 |
| Unit cell lengths | 97.190, 97.190, 44.629 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 14.649 - 2.301 |
| R-factor | 0.1689 |
| Rwork | 0.165 |
| R-free | 0.20030 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 3pak |
| RMSD bond length | 0.013 |
| RMSD bond angle | 0.759 |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Refinement software | PHENIX |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 15.000 | 15.000 | 2.380 |
| High resolution limit [Å] | 2.300 | 4.900 | 2.300 |
| Rmerge | 0.069 | 0.036 | 0.465 |
| Total number of observations | 60818 | ||
| Number of reflections | 10829 | ||
| <I/σ(I)> | 18.3 | ||
| Completeness [%] | 99.9 | 99.6 | 99.9 |
| Redundancy | 5.6 | 5.7 | 4.8 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6 | 290 | The crystals were grown in hanging drops with 10 mM sodium cacodylate (pH 6.0), 80 mM calcium acetate, 0-10% glycerol, and 4-10% (w/v) PEG 20,000 as the reservoir. Before freezing for x-ray data collection, crystals were soaked in reservoir solution of 10 mM calcium acetate without glycerol, but with stepwise additions of 5, 10, and 15% 2-methyl-2,4-pentanediol |






