4WOQ
Crystal Structures of CdNal from Clostridium difficile in complex with ketobutyric
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL13B1 |
Synchrotron site | NSRRC |
Beamline | BL13B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-02-23 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 81.875, 122.612, 122.186 |
Unit cell angles | 90.00, 95.72, 90.00 |
Refinement procedure
Resolution | 25.000 - 2.200 |
Rwork | 0.184 |
R-free | 0.24330 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1f74 |
Data reduction software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | CNS (1.3) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 25.000 | 25.000 | 2.280 |
High resolution limit [Å] | 2.200 | 4.730 | 2.200 |
Rmerge | 0.098 | 0.033 | 0.496 |
Rmeas | 0.111 | 0.037 | 0.576 |
Rpim | 0.051 | 0.017 | 0.287 |
Total number of observations | 556743 | ||
Number of reflections | 120931 | ||
<I/σ(I)> | 7.4 | ||
Completeness [%] | 99.8 | 99.7 | 98.4 |
Redundancy | 4.6 | 4.7 | 3.7 |
CC(1/2) | 0.999 | 0.844 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.2 | 298 | NaAc, PEG 8000 |