4WMB
crystal structure of mouse Xyloside xylosyltransferase 1 complexed with manganese, acceptor ligand and UDP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X29A |
Synchrotron site | NSLS |
Beamline | X29A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-08-27 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.1000 |
Spacegroup name | P 3 |
Unit cell lengths | 89.468, 89.468, 42.934 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 77.480 - 2.050 |
R-factor | 0.20249 |
Rwork | 0.201 |
R-free | 0.23466 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.260 |
Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.120 |
High resolution limit [Å] | 2.050 | 2.050 |
Rmerge | 0.053 | 0.429 |
Number of reflections | 24139 | |
<I/σ(I)> | 17.1 | 2.5 |
Completeness [%] | 99.9 | 99 |
Redundancy | 4.8 | 4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 0.2 M Li2SO4, 0.1 M Bis-Tris, pH 6.5, and 21% PEG3350 |