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4WJL

Structure of human dipeptidyl peptidase 10 (DPPY): a modulator of neuronal Kv4 channels

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyCCD
Collection date2008-12-08
DetectorADSC QUANTUM 315
Wavelength(s)0.97943
Spacegroup nameP 21 21 21
Unit cell lengths80.910, 143.730, 176.250
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution66.546 - 3.400
R-factor0.2092
Rwork0.207
R-free0.24190
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1xfd
RMSD bond length0.008
RMSD bond angle1.362
Data reduction softwareiMOSFLM
Data scaling softwareSCALA (3.3.9)
Phasing softwarePHASER (2.1.4)
Refinement softwarePHENIX ((phenix.refine: 1.7_650))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]111.38866.5463.580
High resolution limit [Å]3.40010.7503.400
Rmerge0.0530.775
Rmeas0.251
Rpim0.1080.0260.378
Total number of observations149063486020630
Number of reflections29019
<I/σ(I)>6.818.22.3
Completeness [%]99.999.299.9
Redundancy5.14.85
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.5293Crystals formed within 2-4 weeks using 100 micrometers of reservoir solution consisting of 20%(w/v) PEG 1500, 0.2 M MgCl2, 0.1 M sodium cacodylate pH 5.5.

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