4WDI
Weak TCR binding to an unstable insulin epitope drives type 1 diabetes
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-02-09 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.917 |
Spacegroup name | P 1 |
Unit cell lengths | 46.930, 62.690, 72.670 |
Unit cell angles | 68.11, 85.79, 85.18 |
Refinement procedure
Resolution | 29.518 - 2.313 |
R-factor | 0.21 |
Rwork | 0.206 |
R-free | 0.28340 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.016 |
RMSD bond angle | 1.598 |
Data reduction software | GDA |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.518 | 29.518 | 2.370 |
High resolution limit [Å] | 2.313 | 10.350 | 2.310 |
Rmerge | 0.029 | 0.351 | |
Rmeas | 0.120 | ||
Rpim | 0.081 | 0.029 | 0.430 |
Total number of observations | 64672 | 770 | 4916 |
Number of reflections | 30132 | ||
<I/σ(I)> | 8.6 | 23.5 | 2 |
Completeness [%] | 90.2 | 95 | 91.5 |
Redundancy | 2.1 | 2.2 | 2.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 291 | 20% PEG 3350, 0.2 M Sodium malonate, and 0.1 M Bis-Tris Propane, pH 6.5 |