4W9J
pVHL:EloB:EloC in complex with (2S,4R)-1-((S)-2-((S)-2-acetamido-4-methylpentanamido)-3,3-dimethylbutanoyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (ligand 13)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM14 |
Synchrotron site | ESRF |
Beamline | BM14 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-01-31 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.9537 |
Spacegroup name | P 41 2 2 |
Unit cell lengths | 93.708, 93.708, 360.836 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 93.708 - 2.200 |
R-factor | 0.2191 |
Rwork | 0.217 |
R-free | 0.26460 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1vcb |
RMSD bond length | 0.008 |
RMSD bond angle | 1.272 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.21) |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 93.708 | 46.854 | 2.320 |
High resolution limit [Å] | 0.986 | 6.960 | 2.200 |
Rmerge | 0.025 | 0.493 | |
Rmeas | 0.083 | ||
Rpim | 0.031 | 0.012 | 0.315 |
Total number of observations | 546027 | 19670 | 40833 |
Number of reflections | 80705 | ||
<I/σ(I)> | 15.4 | 35.4 | 2.3 |
Completeness [%] | 97.4 | 99.1 | 86.2 |
Redundancy | 6.8 | 6.7 | 4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.3 | 291 | PEG 3350, MgOAc, Sodium cacodylate, DTT |