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4VUB

CCDB, A TOPOISOMERASE POISON FROM ESCHERICHIA COLI

Experimental procedure
Source typeROTATING ANODE
Source detailsENRAF-NONIUS FR590
Temperature [K]120
Detector technologyDIFFRACTOMETER
Collection date1997-01
DetectorENRAF-NONIUS FAST
Spacegroup nameC 1 2 1
Unit cell lengths74.910, 36.580, 35.810
Unit cell angles90.00, 115.16, 90.00
Refinement procedure
Resolution15.000 - 1.450
R-factor0.181
Rwork0.181
R-free0.21800
Structure solution methodMOLECULAR SUBSTITUTION
Starting model (for MR)REFINEMENT STARTED FROM REFINED COORDINATES OF THE SAME STRUCTURE AT ROOM TEMPERATURE
RMSD bond length0.006
RMSD bond angle24.661

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Data reduction softwareMADNES
Data scaling softwareCCP4
Phasing softwareX-PLOR (3.851)
Refinement softwareX-PLOR (3.851)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]15.0001.550
High resolution limit [Å]1.4501.450
Rmerge0.087

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0.189

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Number of reflections40715
<I/σ(I)>18.625.36
Completeness [%]83.758.7
Redundancy3.12.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

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4.5Dao-Thi, M.H., (1997) Acta Crystallog. sect D., 54, 975.

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Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein6.0-12.0 (mg/ml)
21dropammonium sulfate0.8-2.0 (M)
31dropagarose0-2 (%)

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PDB entries from 2024-05-15

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