4VUB
CCDB, A TOPOISOMERASE POISON FROM ESCHERICHIA COLI
Experimental procedure
Source type | ROTATING ANODE |
Source details | ENRAF-NONIUS FR590 |
Temperature [K] | 120 |
Detector technology | DIFFRACTOMETER |
Collection date | 1997-01 |
Detector | ENRAF-NONIUS FAST |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 74.910, 36.580, 35.810 |
Unit cell angles | 90.00, 115.16, 90.00 |
Refinement procedure
Resolution | 15.000 - 1.450 |
R-factor | 0.181 |
Rwork | 0.181 |
R-free | 0.21800 |
Structure solution method | MOLECULAR SUBSTITUTION |
Starting model (for MR) | REFINEMENT STARTED FROM REFINED COORDINATES OF THE SAME STRUCTURE AT ROOM TEMPERATURE |
RMSD bond length | 0.006 |
RMSD bond angle | 24.661 * |
Data reduction software | MADNES |
Data scaling software | CCP4 |
Phasing software | X-PLOR (3.851) |
Refinement software | X-PLOR (3.851) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 15.000 | 1.550 |
High resolution limit [Å] | 1.450 | 1.450 |
Rmerge | 0.087 * | 0.189 * |
Number of reflections | 40715 | |
<I/σ(I)> | 18.62 | 5.36 |
Completeness [%] | 83.7 | 58.7 |
Redundancy | 3.1 | 2.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 4.5 | Dao-Thi, M.H., (1997) Acta Crystallog. sect D., 54, 975. * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 6.0-12.0 (mg/ml) | |
2 | 1 | drop | ammonium sulfate | 0.8-2.0 (M) | |
3 | 1 | drop | agarose | 0-2 (%) |