Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4V7P

Recognition of the amber stop codon by release factor RF1.

This is a non-PDB format compatible entry.
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-D
Synchrotron siteAPS
Beamline23-ID-D
Collection date2009-08-05
Wavelength(s)1.0332
Spacegroup nameP 21 21 21
Unit cell lengths210.380, 452.700, 617.090
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.953 - 3.620
R-factor0.26
Rwork0.260
R-free0.29100
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)PDB ENTRIES 3F1E and 3F1F
RMSD bond length0.002
RMSD bond angle0.659
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareCNS
Refinement softwarePHENIX (1.6_289)
Data quality characteristics
 Overall
Low resolution limit [Å]89.000
High resolution limit [Å]3.514
Number of reflections723953
Completeness [%]100.0
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7295.5crystals were grown by the sitting-drop vapor diffusion method dispensed robotically using 1-2 uL ribosome complexes mixed with 1-2 uL reservoir solution (100 mM Tris-OAc, pH 7.0, 200 mM KSCN, 3.4-4.8% PEG20,000, 2.5-11.5% PEG200) at 22.5 C, VAPOR DIFFUSION, SITTING DROP, temperature 295.5K
1VAPOR DIFFUSION, SITTING DROP7295.5crystals were grown by the sitting-drop vapor diffusion method dispensed robotically using 1-2 uL ribosome complexes mixed with 1-2 uL reservoir solution (100 mM Tris-OAc, pH 7.0, 200 mM KSCN, 3.4-4.8% PEG20,000, 2.5-11.5% PEG200) at 22.5 C, VAPOR DIFFUSION, SITTING DROP, temperature 295.5K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon