4UY6
Crystal structure of Histidine and SAH bound Histidine-specific methyltransferase EgtD from Mycobacterium smegmatis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Temperature [K] | 295 |
Detector technology | CCD |
Collection date | 2014-07-23 |
Detector | ADSC QUANTUM 315r |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 71.045, 71.045, 124.984 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.612 - 2.040 |
R-factor | 0.1853 |
Rwork | 0.180 |
R-free | 0.23500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4uy5 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.110 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX ((PHENIX.REFINE)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.080 |
High resolution limit [Å] | 2.000 | 2.040 |
Rmerge | 0.080 | 0.360 |
Number of reflections | 21081 | |
<I/σ(I)> | 60 | 8.6 |
Completeness [%] | 99.8 | 99.7 |
Redundancy | 14.5 | 11.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 9 | 0.1 M TRIS PH9.0, 20% PEG 8K, 0.05M MGCL2 |