4TXM
Crystal structure of uridine phosphorylase from Schistosoma mansoni in complex with thymine
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2011-07-06 |
| Detector | DECTRIS PILATUS 2M |
| Wavelength(s) | 0.9136 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 79.361, 84.872, 87.422 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 42.436 - 1.930 |
| R-factor | 0.2163 |
| Rwork | 0.214 |
| R-free | 0.25190 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4txj |
| RMSD bond length | 0.003 |
| RMSD bond angle | 0.670 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX ((phenix.refine: 1.9_1692)) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 2.040 | |
| High resolution limit [Å] | 1.930 | 5.750 | 1.930 |
| Rmerge | 0.106 | 0.038 | 0.590 |
| Rmeas | 0.119 | 0.042 | 0.668 |
| Total number of observations | 209662 | ||
| Number of reflections | 43916 | 1843 | 6396 |
| <I/σ(I)> | 10.1 | 28.29 | 2.44 |
| Completeness [%] | 97.1 | 98.6 | 88.8 |
| Redundancy | 4.7 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 291 | 200mM ammonium sulphate, 100mM Bis-Tris pH5.5, 20-25% PEG 3350 |






