4TXJ
Crystal structure of uridine phosphorylase from Schistosoma mansoni in complex with thymidine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-09-11 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9611 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 95.820, 108.080, 116.060 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 79.090 - 1.662 |
R-factor | 0.1871 |
Rwork | 0.186 |
R-free | 0.21090 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3eue |
RMSD bond length | 0.010 |
RMSD bond angle | 1.068 |
Data reduction software | XDS |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.9_1692)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 79.090 | 79.090 | 1.700 |
High resolution limit [Å] | 1.660 | 7.430 | 1.660 |
Rmerge | 0.122 | 0.074 | 0.593 |
Number of reflections | 141838 | ||
<I/σ(I)> | 7 | 2.1 | |
Completeness [%] | 99.9 | 98.3 | 100 |
Redundancy | 4.4 | 4.1 | 4.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 291 | 200mM Ammonium suphate, 100mM Bis-Tris pH5.5, 20-25% Peg3350 |