4TVU
Crystal structure of trehalose synthase from Deinococcus radiodurans reveals a closed conformation for catalysis of the intramolecular isomerization
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL13B1 |
Synchrotron site | NSRRC |
Beamline | BL13B1 |
Temperature [K] | 110 |
Detector technology | CCD |
Collection date | 2013-03-24 |
Detector | RAYONIX MX300HE |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 95.609, 195.896, 130.986 |
Unit cell angles | 90.00, 92.89, 90.00 |
Refinement procedure
Resolution | 30.000 - 2.700 |
R-factor | 0.19586 |
Rwork | 0.194 |
R-free | 0.23626 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3zoa |
RMSD bond length | 0.010 |
RMSD bond angle | 1.416 |
Data reduction software | SCALEPACK |
Data scaling software | SCALEPACK |
Refinement software | REFMAC (5.8.0049) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 2.800 |
High resolution limit [Å] | 2.700 | 5.800 | 2.700 |
Rmerge | 0.096 | 0.033 | 0.408 |
Total number of observations | 462831 | ||
Number of reflections | 128557 | ||
<I/σ(I)> | 9.2 | ||
Completeness [%] | 97.7 | 99.5 | 89.4 |
Redundancy | 3.6 | 3.7 | 3.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 288 | 15 % PEG 4000, 0.2 M sodium acetate trihydrate, 0.1 M Tris-HCl (pH 8.5) |