4TN4
Crystal structure of ternary complex of Plasmodium vivax SHMT with glycine and a novel pyrazolopyran 33G: (4S)-6-amino-4-(5-cyano-3'-fluorobiphenyl-3-yl)-4-cyclobutyl-3-methyl-2,4-dihydropyrano[2,3-c]pyrazole-5-carbonitrile
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL13B1 |
Synchrotron site | NSRRC |
Beamline | BL13B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-11-29 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.0 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 100.412, 57.989, 236.955 |
Unit cell angles | 90.00, 89.99, 90.00 |
Refinement procedure
Resolution | 30.000 - 2.200 |
R-factor | 0.2242 |
Rwork | 0.217 |
R-free | 0.28550 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4oyt |
RMSD bond length | 0.009 |
RMSD bond angle | 1.524 |
Data reduction software | DENZO |
Data scaling software | HKL-2000 |
Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 2.280 |
High resolution limit [Å] | 2.200 | 4.730 | 2.200 |
Rmerge | 0.015 | 0.011 | 0.065 |
Total number of observations | 151739 | ||
Number of reflections | 64394 | ||
<I/σ(I)> | 44.9 | ||
Completeness [%] | 92.5 | 93.6 | 83.9 |
Redundancy | 2.4 | 2.8 | 1.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 8.5 | 297 | PEG4000, 0.06-0.12 M NaCl, 0.1 M Tris-HCl pH 8.5 |