4S1Y
X-ray structure of human serum albumin complexed with cisplatin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 57.789, 86.474, 59.141 |
Unit cell angles | 90.00, 103.70, 90.00 |
Refinement procedure
Resolution | 57.460 - 3.160 |
R-factor | 0.22781 |
Rwork | 0.223 |
R-free | 0.32943 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB code 1HK1 |
RMSD bond length | 0.011 |
RMSD bond angle | 1.384 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0049) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 57.460 |
High resolution limit [Å] | 3.160 |
Rmerge | 0.149 |
Number of reflections | 9393 |
Completeness [%] | 96.4 |
Redundancy | 2.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.4 | 298 | Crystals of a cisplatin/HSA adduct were obtained by soaking: more in detail, crystals of defatted HSA, grown after four weeks by sitting drop vapour diffusion method at 25 C using a reservoir solution of 30 % w/v polyethylene glycol 3350 in 50 mM potassium phosphate at pH 7.4 and protein concentration of 30 mg mL-1 (see experimental section or further details), were soaked for 24 h in a 0.005 M cisplatin solution in the same reservoir, VAPOR DIFFUSION, SITTING DROP, temperature 298K |