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4S1Q

Crystal structure of a VRC01-lineage antibody, 45-VRC01.H03+06.D-001739, in complex with clade A/E HIV-1 gp120 core

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2013-02-15
DetectorMAR scanner 300 mm plate
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths66.179, 78.925, 194.214
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution41.355 - 2.400
R-factor0.2211
Rwork0.219
R-free0.25800
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3se8
RMSD bond length0.004
RMSD bond angle0.956
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASES
Refinement softwarePHENIX ((phenix.refine: dev_1839))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.440
High resolution limit [Å]2.4002.400
Rmerge0.0940.470
Number of reflections39180
<I/σ(I)>12.41.63
Completeness [%]96.380.4
Redundancy3.71.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.529310% PEG 8000, 0.1M Tris-HCl 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K

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