4RTZ
Crystal structure of the c-Src-SH3 domain in complex with the high affinity peptide VSL12
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-03-14 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.979491 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 32.904, 41.046, 44.066 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.035 - 0.979 |
R-factor | 0.1435 |
Rwork | 0.143 |
R-free | 0.15840 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4jz4 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.381 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.1.30) |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 41.050 | 41.050 | 1.000 |
High resolution limit [Å] | 0.980 | 5.270 | 0.980 |
Rmerge | 0.047 | 0.037 | 0.836 |
Total number of observations | 729 | 4416 | |
Number of reflections | 34334 | ||
<I/σ(I)> | 12.5 | 29.9 | 1.4 |
Completeness [%] | 98.1 | 97.7 | 89.6 |
Redundancy | 3.1 | 2.7 | 2.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 298 | 1.7 M Ammonium sulphate, 0.1 M Hepes, 5 mM NiCl2 and 10% Glycerol, pH 7.5, vapor diffusion, hanging drop, temperature 298K |