4RQS
Crystal structure of fully glycosylated HIV-1 gp120 core bound to CD4 and 17b Fab
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-08-22 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 171.318, 171.318, 151.857 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.500 - 4.493 |
R-factor | 0.2785 |
Rwork | 0.276 |
R-free | 0.32180 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.757 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.8.1_1168)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.500 | 4.700 |
High resolution limit [Å] | 4.493 | 4.493 |
Number of reflections | 13317 | |
<I/σ(I)> | 2.4 | |
Completeness [%] | 95.2 | 97.3 |
Redundancy | 4.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.5 | 293 | 1.4 M sodium formate, 16.6% PEG 3350, 0.1 M CaCl2, 0.1 M Acetate pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K |