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4RIL

Structure of the amyloid forming segment, GAVVTGVTAVA, from the NAC domain of Parkinson's disease protein alpha-synuclein, residues 68-78, determined by electron diffraction

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeELECTRON MICROSCOPE
Source detailsTECNAI F20 TEM
Temperature [K]100
Detector technologyCMOS
Collection date2014-08-28
DetectorTVIPS F416 CMOS CAMERA
Wavelength(s)0.0251
Spacegroup nameC 1 2 1
Unit cell lengths70.810, 4.820, 16.790
Unit cell angles90.00, 105.68, 90.00
Refinement procedure
Resolution16.430 - 1.430
R-factor0.2512
Rwork0.248
R-free0.27500
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4rik
RMSD bond length0.010
RMSD bond angle1.650
Data reduction softwareXDS
Data scaling softwareAimless (0.3.11)
Phasing softwarePHASER (2.5.6)
Refinement softwareBUSTER-TNT (BUSTER 2.10.0)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]16.43016.4301.600
High resolution limit [Å]1.4303.2001.430
Rmerge0.1750.0800.565
Total number of observations4781245
Number of reflections1073
<I/σ(I)>5.5132.5
Completeness [%]89.99482.5
Redundancy4.43.84.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1batch crystallization43101 mg of synthetic peptide GAVVTGVTAVA was dissolved in 1 ml of sterile water and shaken overnight in an orbital mixing plate, pH 4.0, batch crystallization, temperature 310K

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