4QT7
Crystal structure of the c-Src SH3 domain in complex with a peptide from the Hepatitis C virus NS5A-protein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-1 |
Synchrotron site | ESRF |
Beamline | ID14-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-11-28 |
Wavelength(s) | 0.93340 |
Spacegroup name | I 41 |
Unit cell lengths | 62.307, 62.307, 27.266 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 24.979 - 1.550 |
R-factor | 0.1605 |
Rwork | 0.159 |
R-free | 0.19450 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4jz4 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.263 |
Data scaling software | Aimless (0.2.17) |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 24.980 | 24.980 | 1.580 |
High resolution limit [Å] | 1.550 | 8.490 | 1.550 |
Rmerge | 0.091 | 0.044 | 0.489 |
Rpim | 0.012 | 0.386 | |
Total number of observations | 642 | 801 | |
Number of reflections | 14570 | ||
<I/σ(I)> | 23.7 | 54.4 | 2.3 |
Completeness [%] | 98.2 | 97.2 | 82.8 |
Redundancy | 9.6 | 11.7 | 2.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | 2M Ammonium sulphate, 0.1M sodium chloride, 0.86mM methyl-beta-cyclodextrin, 0.1M Hepes, pH 7, vapor diffusion, hanging drop, temperature 298K |