4Q2X
Crystal structure of Arginyl-tRNA synthetase complexed with L-canavanine
Experimental procedure
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Detector technology | CCD |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.98703 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 75.393, 109.310, 175.011 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.476 - 2.798 |
R-factor | 0.2144 |
Rwork | 0.212 |
R-free | 0.26520 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.186 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.2_1309) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 2.850 |
High resolution limit [Å] | 2.798 | 7.560 | 2.800 |
Rmerge | 0.103 | 0.064 | 0.313 |
Number of reflections | 35623 | ||
<I/σ(I)> | 10 | ||
Completeness [%] | 97.8 | 97.5 | 95.7 |
Redundancy | 5.3 | 7.9 | 3.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.7 | 293 | 0.085mM Sodium citrate tribasic dehydrate, 24% Polyethylene glycol 4000, 0.17M Ammonium acetate, 15% Glycerol, pH 5.7, VAPOR DIFFUSION, HANGING DROP, temperature 293K |