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4Q2X

Crystal structure of Arginyl-tRNA synthetase complexed with L-canavanine

Experimental procedure
Source typeSYNCHROTRON
Source detailsPAL/PLS BEAMLINE 5C (4A)
Synchrotron sitePAL/PLS
Beamline5C (4A)
Detector technologyCCD
DetectorADSC QUANTUM 315r
Wavelength(s)0.98703
Spacegroup nameP 21 21 21
Unit cell lengths75.393, 109.310, 175.011
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.476 - 2.798
R-factor0.2144
Rwork0.212
R-free0.26520
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.010
RMSD bond angle1.186
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.8.2_1309)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]30.00030.0002.850
High resolution limit [Å]2.7987.5602.800
Rmerge0.1030.0640.313
Number of reflections35623
<I/σ(I)>10
Completeness [%]97.897.595.7
Redundancy5.37.93.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.72930.085mM Sodium citrate tribasic dehydrate, 24% Polyethylene glycol 4000, 0.17M Ammonium acetate, 15% Glycerol, pH 5.7, VAPOR DIFFUSION, HANGING DROP, temperature 293K

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PDB entries from 2024-12-25

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