4PY5
Thermovibrio ammonificans RNase H3 in complex with 19-mer RNA/DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-01-31 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.91841 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 58.449, 67.661, 107.514 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.090 - 2.100 |
R-factor | 0.1857 |
Rwork | 0.183 |
R-free | 0.23300 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.074 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX (AutoSol) |
Refinement software | PHENIX ((phenix.refine: 1.8.1_1168)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.230 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.069 | 0.564 |
Number of reflections | 25396 | |
<I/σ(I)> | 2.66 | |
Completeness [%] | 99.3 | 95.7 |
Redundancy | 4.27 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 291 | 0.2 M AmSO4, 0.1 M BisTris, 25% PEG 3350, 10 mM spermine tetrahydrochloride, pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 291K |