4PH5
Structure of human DNA polymerase beta complexed with a nicked DNA containing a AC at N-1 position and GC at N position
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2013-10-29 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 50.613, 80.377, 55.294 |
Unit cell angles | 90.00, 107.61, 90.00 |
Refinement procedure
Resolution | 20.000 - 2.550 |
R-factor | 0.1945 |
Rwork | 0.191 |
R-free | 0.26120 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.629 |
Refinement software | PHENIX ((phenix.refine: 1.8.4_1496)) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 20.000 |
High resolution limit [Å] | 2.550 |
Number of reflections | 13392 |
<I/σ(I)> | 3.8 |
Completeness [%] | 98.2 |
Redundancy | 3.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 298 | 14%?23% PEG3400, and 350 mM sodium acetate in 50 mM imidazole (pH 7.5) |